Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCCCAGTGTGCTTGAGAAACAAACTGCACCCACTGAACTCCGCAGCTAGCAT
.(((((((((((..((..(((&.)))..)).)))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021950
GeneSymbolMS4A1
Binding site6,60
Score1.0
Seed1
Au0.5
Energy-22.3
Binding len22
Me-5.939
Phylopstem0.4393141250000001
Phylopflank0.41953845124999994
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end5
Position5UTR
2D Structure