Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTAGGACCAGGCAGTTGTAT
.(((((((((((((.((((((&)))))).))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021952
GeneSymbolELAVL4
Binding site3829,3852
Score0.833
Seed1
Au0.721
Energy-23.9
Binding len23
Me-4.529
Phylopstem4.758673333333333
Phylopflank4.5912807625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure