Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGTGTCGGGTA
(((((((((((...........&))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_021954
GeneSymbolGJA3
Binding site2220,2232
Score0.923
Seed1
Au0.676
Energy-17.5
Binding len12
Me-10.399
Phylopstem-0.4347704909090909
Phylopflank-0.07205511750000002
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure