Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAACTACTGTTGCCAGGA
.(((((((.(((..((((.(((&))))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_021954
GeneSymbolGJA3
Binding site2571,2589
Score0.846
Seed1
Au0.676
Energy-17.1
Binding len18
Me-6.996
Phylopstem0.684494757142857
Phylopflank0.67367042625
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure