Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAACACCCAGCAGCCGGGCTGCGAG
((((((((.(((((((..(((&.)))..))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021954
GeneSymbolGJA3
Binding site336,366
Score1.0
Seed1
Au0.382
Energy-26.8
Binding len22
Me-4.994
Phylopstem0.286315125
Phylopflank0.24284318999999993
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure