Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCTGCGACCGCTGGCCCTGCC
..(((((((((((((((.(((&)))..))))))))).)))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021954
GeneSymbolGJA3
Binding site715,739
Score1.0
Seed1
Au0.338
Energy-22.6
Binding len24
Me-4.957
Phylopstem-0.1394977444444444
Phylopflank0.06895087999999999
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure