Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATAGCAATTCTTCAGCTGCAAG
(((((((((.((((((..(((&)))...))))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021956
GeneSymbolGRIK2
Binding site2757,2782
Score0.885
Seed1
Au0.588
Energy-20.5
Binding len25
Me-5.18
Phylopstem5.511237618888888
Phylopflank6.5561495999999995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure