Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATCACCCGCAACAACAACAGCAGCAGCAACAGCCGCAGCAGCAAC
((((.(((((((((((.....&.))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021958
GeneSymbolHLX
Binding site776,824
Score1.0
Seed0
Au0.294
Energy-26.0
Binding len18
Me-8.057
Phylopstem0.8287085454545455
Phylopflank0.9955102512499998
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure