Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTAGACCTCAGCGACAGA
(((..((((.((((.(((((.&))))))))).))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021959
GeneSymbolPPP1R11
Binding site135,155
Score0.923
Seed0
Au0.471
Energy-16.4
Binding len20
Me-13.067
Phylopstem0.4586370000000001
Phylopflank0.5764694499999999
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
Position5UTR
2D Structure