Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACAAGCAATGCTGTT
..(((((...(.(((((((((&))))))))).)...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021961
GeneSymbolTEAD1
Binding site5492,5512
Score0.846
Seed0
Au0.618
Energy-20.8
Binding len20
Me-12.916
Phylopstem0.03706024444444442
Phylopflank-0.20043650750000003
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure