Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGGTTGCCGCGGCAGCAGT
((((.((((((((....(((.&))).....)))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021962
GeneSymbolABR
Binding site3392,3414
Score0.846
Seed0
Au0.382
Energy-22.9
Binding len22
Me-9.882
Phylopstem4.169
Phylopflank4.507999999999999
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end3
Position3UTR
2D Structure