Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCTCGCCGCGGCGGCGT
.(((.((((((((.(((((((&)))))))..)))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021968
GeneSymbolH4C11
Binding site142,164
Score0.846
Seed0
Au0.279
Energy-28.4
Binding len22
Me-8.769
Phylopstem0.155663375
Phylopflank0.03647937625000001
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure