Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGGCAGCCCAGAAACCCCAGGCGTGGAGATTGATCCTGCGAG
(((((((((.((((((..(((&)))..)))))))))........................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021970
GeneSymbolLAMTOR3
Binding site70,115
Score0.846
Seed1
Au0.412
Energy-18.1
Binding len45
Me-5.18
Phylopstem0.4991282727272729
Phylopflank0.20461898499999998
Longest consecutive pairings9
Position of longest consecutive pairings31
Pairings in 3prime end6
Position5UTR
2D Structure