Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCCGCGGCGCCGGCTGCGAA
(((((((((..(((((..(((&)))..)))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021972
GeneSymbolSPHK1
Binding site12,34
Score0.923
Seed1
Au0.317
Energy-22.0
Binding len22
Me-8.005
Phylopstem-0.9504290555555556
Phylopflank0.07838521065892862
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure