Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTATTGCTGTGCCGCCGGCTGCT
..(((((((((((.(((((((&))).))))...))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021972
GeneSymbolSPHK1
Binding site850,874
Score0.923
Seed1
Au0.397
Energy-21.7
Binding len24
Me-5.814
Phylopstem3.0197448333333328
Phylopflank2.8747171399999996
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure