Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGCTCTTCCGGAGTCACGTGCAGC
((((((((.((((((((((((&))))))))).....))).)))....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021972
GeneSymbolSPHK1
Binding site521,552
Score0.846
Seed1
Au0.412
Energy-21.2
Binding len31
Me-4.994
Phylopstem1.2543049470588234
Phylopflank1.42752319875
Longest consecutive pairings9
Position of longest consecutive pairings22
Pairings in 3prime end8
PositionCDS
2D Structure