Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATCTGCATTGGTGGGAGGGGTG
((((..(((.((((((((((((&)))))))))))))))....)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_021974
GeneSymbolPOLR2F
Binding site1609,1633
Score0.846
Seed0
Au0.426
Energy-19.6
Binding len24
Me-11.2
Phylopstem-0.13489548
Phylopflank0.66454898025
Longest consecutive pairings15
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure