Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGAGGGGTGTCCGCTGCCCTGGAGAAGGGTTA
.(((((((((.((((((((((&)))))))))).)))...............)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_021974
GeneSymbolPOLR2F
Binding site1620,1656
Score0.923
Seed1
Au0.412
Energy-30.8
Binding len36
Me-6.618
Phylopstem0.4787421
Phylopflank0.8579785397499998
Longest consecutive pairings10
Position of longest consecutive pairings26
Pairings in 3prime end8
Position3UTR
2D Structure