Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCATCAACCTCTCAGCTGCC
..(((((((.(((((...((.&))...)))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021980
GeneSymbolOPTN
Binding site236,257
Score0.846
Seed1
Au0.471
Energy-20.6
Binding len21
Me-6.433
Phylopstem0.9065178571428572
Phylopflank1.3815089437499999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure