Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCTGGCTTCCAAACAGCTGCAAA
(((((((((.((..((.((((&)).)).))..))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021980
GeneSymbolOPTN
Binding site1537,1562
Score1.0
Seed1
Au0.529
Energy-20.2
Binding len25
Me-7.326
Phylopstem3.0981854444444443
Phylopflank3.1733882200000005
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure