Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGCACTGCT
..((((.(((((((((.....&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021980
GeneSymbolOPTN
Binding site2547,2561
Score0.846
Seed0
Au0.574
Energy-20.0
Binding len14
Me-6.501
Phylopstem0.19425204444444447
Phylopflank0.06800476999999998
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure