Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCCTCATAGAAGGGGAAACTGATGCCAGGA
.((((((((.((..........&.)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_021988
GeneSymbolUBE2V1
Binding site360,391
Score0.923
Seed1
Au0.544
Energy-15.6
Binding len12
Me-8.15
Phylopstem0.825854125
Phylopflank0.9729615037500001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure