Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGAATGCAGGAAGACCGTGATGGGAGCTGCAGC
((((((((.(.(((....(((&.)))..))).).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021994
GeneSymbolZNF277
Binding site52,88
Score0.846
Seed1
Au0.382
Energy-19.7
Binding len21
Me-8.787
Phylopstem0.012328375000000003
Phylopflank0.39653509875000004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure