Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCGGCAGCTGTAGCTGCAGC
((((((((((((((((.....&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_021998
GeneSymbolZNF711
Binding site173,196
Score1.0
Seed1
Au0.353
Energy-27.0
Binding len18
Me-3.938
Phylopstem0.1686936625
Phylopflank0.624564835875
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure