Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCCCACTGCAGCCTGCGGT
(((((((((((((.(..((((&))))..).)))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022003
GeneSymbolFXYD6
Binding site550,573
Score0.872
Seed1
Au0.397
Energy-23.2
Binding len23
Me-5.027
Phylopstem0.16899594285714284
Phylopflank0.2036896125000001
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure