Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTGCAGCCTGCTGGCCCCCATGGTCCTGGCCAGTGCAGCTGA
...(((((((((((((((((.&))).)))))))..........................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022003
GeneSymbolFXYD6
Binding site92,137
Score0.846
Seed0
Au0.441
Energy-21.6
Binding len45
Me-6.515
Phylopstem0.6127244886363635
Phylopflank0.62379621
Longest consecutive pairings7
Position of longest consecutive pairings34
Pairings in 3prime end7
PositionCDS
2D Structure