Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCGCAAGGTGTGGGACCTCCCGCGGCTGTG
..((((((((((.....((((&.)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022042
GeneSymbolSLC26A1
Binding site1487,1522
Score0.846
Seed1
Au0.25
Energy-21.3
Binding len17
Me-8.071
Phylopstem-0.73385236
Phylopflank0.5993265687499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure