Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCGGGTCGGTGCTGAAGCTGCTCAATACGCACCACCGCGTGCGGCTGCAC
.((((((((((((.((..(((&.))))).)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022044
GeneSymbolSDF2L1
Binding site143,197
Score0.808
Seed1
Au0.397
Energy-21.3
Binding len21
Me-4.65
Phylopstem3.7076412307692297
Phylopflank2.1415797824999996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure