Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGCGGCCAAGGAAGAGGAGCTGCTGCGGCTGCAGCAGCTGCAGG
((((((((((((((((..(((&)))..))))))..........................)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022047
GeneSymbolDEF6
Binding site1054,1102
Score0.846
Seed1
Au0.353
Energy-25.8
Binding len48
Me-3.938
Phylopstem3.370135785714286
Phylopflank4.082591947999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure