Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGCTGGATTTGCGAC
((((((.(.((((((((((((&)))))))))))).).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022048
GeneSymbolCSNK1G1
Binding site4518,4540
Score1.0
Seed0
Au0.574
Energy-24.7
Binding len22
Me-6.538
Phylopstem0.3875978658333333
Phylopflank0.15792797462499997
Longest consecutive pairings12
Position of longest consecutive pairings10
Pairings in 3prime end8
Position3UTR
2D Structure