Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCAATAGCTGAGCTGTAGC
((((((((.(((((((..(((&)))...))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022048
GeneSymbolCSNK1G1
Binding site3049,3071
Score1.0
Seed1
Au0.485
Energy-19.3
Binding len22
Me-4.994
Phylopstem0.028771962499999998
Phylopflank0.008078818750000001
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure