Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCGACCCCAGCGGGCT
..((.((((.(((((.(((((&)))))))))).))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022049
GeneSymbolGPR88
Binding site1729,1749
Score0.846
Seed0
Au0.412
Energy-21.6
Binding len20
Me-10.552
Phylopstem-0.30213140000000005
Phylopflank-0.03302157650000001
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure