Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTCAATCCTGGCATGCAT
.((((((((.(((((..((((&))))..))))).)))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022052
GeneSymbolNXF3
Binding site224,246
Score0.846
Seed1
Au0.529
Energy-19.0
Binding len22
Me-5.269
Phylopstem0.6660159999999999
Phylopflank1.131394741375
Longest consecutive pairings5
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure