Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGCAGAGACAGCCACCTTACACTCCTAAACCAGCTGCTGCAGG
(((((((.(((((((((((((&.)))))))).......))).)).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022061
GeneSymbolMRPL17
Binding site448,495
Score0.923
Seed1
Au0.412
Energy-25.3
Binding len31
Me-6.251
Phylopstem0.2654833428571428
Phylopflank0.015774092
Longest consecutive pairings8
Position of longest consecutive pairings22
Pairings in 3prime end8
PositionCDS
2D Structure