Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TAGCTGTAGCTGCC
..(((((((((((((......&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022061
GeneSymbolMRPL17
Binding site1746,1760
Score0.962
Seed1
Au0.574
Energy-21.0
Binding len14
Me-5.19
Phylopstem0.3031358984615385
Phylopflank0.309030072
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure