Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGAGTACGCATGCTGCT
..(((((((((....(((((.&)))))....)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022063
GeneSymbolFAM204A
Binding site3406,3426
Score0.846
Seed1
Au0.588
Energy-21.0
Binding len20
Me-11.185
Phylopstem-0.20579859000000003
Phylopflank-0.18878696
Longest consecutive pairings5
Position of longest consecutive pairings15
Pairings in 3prime end5
Position3UTR
2D Structure