Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGTAACTCATGCAGCTCCATCAGGAGCAAG
(((((((((((((((((((((&)))))))))))...)))))).........)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022063
GeneSymbolFAM204A
Binding site9376,9410
Score0.846
Seed1
Au0.588
Energy-20.6
Binding len34
Me-3.938
Phylopstem1.5052888333333332
Phylopflank1.4109528224999996
Longest consecutive pairings11
Position of longest consecutive pairings23
Pairings in 3prime end8
Position3UTR
2D Structure