Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGCACCGCTTCTGCGC
.(((((..((((.((((((((&))))))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022064
GeneSymbolRNF123
Binding site1053,1073
Score0.846
Seed0
Au0.441
Energy-23.2
Binding len20
Me-8.94
Phylopstem3.1122801874999997
Phylopflank3.6920316800000004
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end8
PositionCDS
2D Structure