Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AACCGCAGTTGGAAC
((.(((((((((((.......&))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001366057
GeneSymbolOTUD4
Binding site4043,4058
Score1.0
Seed0
Au0.603
Energy-20.0
Binding len15
Me-6.464
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end1
Position3UTR
2D Structure