Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCACAGCTGCC
..(((((((.((((((.....&)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022066
GeneSymbolUBE2O
Binding site2348,2363
Score0.846
Seed1
Au0.338
Energy-23.5
Binding len15
Me-6.2
Phylopstem4.942214857142857
Phylopflank5.662095198875
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure