Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGGAGTTGTAGCTGCT
..((((((((((((.(((((.&))))).)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022066
GeneSymbolUBE2O
Binding site4417,4437
Score0.846
Seed1
Au0.441
Energy-23.1
Binding len20
Me-5.692
Phylopstem5.883944538461539
Phylopflank4.971103687
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure