Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCTCTTCTGTCGGAGGCTGCTGGGGGCAAGAGCAGCTGCAC
.(((((((((..((((..(((&.)))....))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022066
GeneSymbolUBE2O
Binding site4623,4669
Score1.0
Seed1
Au0.338
Energy-23.2
Binding len24
Me-9.965
Phylopstem4.268643333333333
Phylopflank5.386878724750002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure