Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTTGGGCGCTGGAGTACGCTTGGGACTGGGGCTGCGAG
((((((((.(((((.((((((&.)).)))).))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022067
GeneSymbolVIPAS39
Binding site115,156
Score0.923
Seed1
Au0.353
Energy-26.5
Binding len24
Me-5.729
Phylopstem-0.05191732374999998
Phylopflank0.32452982075000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure