Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCACAGCCGCACAGGACGCGAGGATGCTGACAGT
((((((((((((((((.((((&)))).)))))))))..............)))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022070
GeneSymbolHEATR6
Binding site4479,4516
Score0.846
Seed1
Au0.338
Energy-24.2
Binding len37
Me-3.938
Phylopstem4.499771204451614
Phylopflank4.043720821337501
Longest consecutive pairings9
Position of longest consecutive pairings23
Pairings in 3prime end7
Position3UTR
2D Structure