Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTGCAAAAGTTGGGGCTGCAAT
((((((((.(((((((((...&))))))...))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022074
GeneSymbolFAM111A
Binding site2707,2729
Score0.923
Seed1
Au0.618
Energy-18.9
Binding len22
Me-4.994
Phylopstem0.25154580833333334
Phylopflank0.20110877624999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure