Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAAGCAACTGCCGGAGCTGA
...(((((((((((((.((((&))))...))))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022078
GeneSymbolGPATCH3
Binding site554,578
Score0.846
Seed0
Au0.397
Energy-21.2
Binding len24
Me-6.515
Phylopstem2.00525555625
Phylopflank2.0754072837499997
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure