Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCCGCCTACCCCCTCGGATCATCACCCAGCTGCAGCTCCAGT
(((.(((((((((((...(((&.)))))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022078
GeneSymbolGPATCH3
Binding site646,692
Score0.923
Seed0
Au0.353
Energy-21.4
Binding len20
Me-7.203
Phylopstem4.315824454545455
Phylopflank2.5061438862500003
Longest consecutive pairings14
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure