Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTTGCAACCCCATCCAGGAGACATATTTCCAGCAGCTGGCAC
.((((((((((((((((((((&))))..)))))))......................))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022081
GeneSymbolHPS4
Binding site2565,2611
Score0.923
Seed1
Au0.397
Energy-22.8
Binding len46
Me-3.793
Phylopstem2.1785317355555542
Phylopflank2.2355740062500002
Longest consecutive pairings7
Position of longest consecutive pairings33
Pairings in 3prime end8
PositionCDS
2D Structure