Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCTGCTCCAGGGAGCACCAGCTGCAGCTGA
...((((((((((((..((((&)))).................)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022081
GeneSymbolHPS4
Binding site4045,4079
Score0.846
Seed0
Au0.397
Energy-22.6
Binding len34
Me-6.748
Phylopstem0.8985917749999999
Phylopflank2.1543332402499997
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure