Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGACAACCATGAGCGGGCCAGG
..(((((((((((((((((...&))))))))........)).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330762
GeneSymbolCNTRL
Binding site4865,4892
Score0.872
Seed1
Au0.426
Energy-24.2
Binding len27
Me-4.957
Phylopstem2.392984423076923
Phylopflank2.4519089125
Longest consecutive pairings8
Position of longest consecutive pairings19
Pairings in 3prime end5
PositionCDS
2D Structure